dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03726
Location and strand information: 3767428 - 3767721 (-)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03727
Location and strand information: 3767721 - 3768356 (-)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03728
Location and strand information: 3768375 - 3768923 (-)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03729
Location and strand information: 3768928 - 3769710 (-)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03730
Location and strand information: 3769718 - 3770530 (-)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03731
Location and strand information: 3770758 - 3771735 (+)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03732
Location and strand information: 3771749 - 3772735 (+)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03733
Location and strand information: 3772750 - 3773316 (+)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03734
Location and strand information: 3773313 - 3773888 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03735
Location and strand information: 3773857 - 3774411 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03736
Location and strand information: 3774418 - 3775143 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03737
Location and strand information: 3775191 - 3776624 (+)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03738
Location and strand information: 3776647 - 3776934 (+)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03739
Location and strand information: 3777017 - 3777508 (+)
Family: 4.A.2.1.7
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03740
Location and strand information: 3777554 - 3778408 (+)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03741
Location and strand information: 3778405 - 3778677 (+)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03742
Location and strand information: 3778717 - 3779442 (-)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.5813
Protein molecular weight: 26912.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03743
Location and strand information: 3779439 - 3780092 (-)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03744
Location and strand information: 3780325 - 3782658 (-)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03745
Location and strand information: 3782796 - 3783878 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000002504_3|CGC61
Gene ID: MGYG000002504_03746
Location and strand information: 3783878 - 3784978 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002504_03726	putative phospholipid ABC transporter-binding protein MlaB	TC	3767428	3767721	-	3.A.1.27.3
MGYG000002504_03727	putative phospholipid-binding protein MlaC	TC	3767721	3768356	-	3.A.1.27.3
MGYG000002504_03728	putative phospholipid ABC transporter-binding protein MlaD	TC	3768375	3768923	-	3.A.1.27.3
MGYG000002504_03729	putative phospholipid ABC transporter permease protein MlaE	TC	3768928	3769710	-	3.A.1.27.3
MGYG000002504_03730	putative phospholipid import ATP-binding protein MlaF	TC	3769718	3770530	-	3.A.1.27.3
MGYG000002504_03731	Inner membrane protein YrbG	TC	3770758	3771735	+	2.A.19.5.1
MGYG000002504_03732	Arabinose 5-phosphate isomerase KdsD	STP	3771749	3772735	+	SIS\| CBS\| CBS
MGYG000002504_03733	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	3772750	3773316	+	Hydrolase_3
MGYG000002504_03734	Lipopolysaccharide export system protein LptC	TC	3773313	3773888	+	1.B.42.1.2
MGYG000002504_03735	Lipopolysaccharide export system protein LptA	TC	3773857	3774411	+	1.B.42.1.2
MGYG000002504_03736	Lipopolysaccharide export system ATP-binding protein LptB	TC	3774418	3775143	+	1.B.42.1.2
MGYG000002504_03737	RNA polymerase sigma-54 factor	null	3775191	3776624	+	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000002504_03738	Ribosome hibernation promoting factor	null	3776647	3776934	+	Ribosomal_S30AE
MGYG000002504_03739	Nitrogen regulatory protein	TC	3777017	3777508	+	4.A.2.1.7
MGYG000002504_03740	RNase adapter protein RapZ	null	3777554	3778408	+	ATP_bind_2
MGYG000002504_03741	Phosphocarrier protein NPr	TC	3778405	3778677	+	8.A.8.1.5
MGYG000002504_03742	Biosynthetic peptidoglycan transglycosylase	CAZyme	3778717	3779442	-	GT51
MGYG000002504_03743	Glyoxalase ElbB	null	3779439	3780092	-	No domain
MGYG000002504_03744	Aerobic respiration control sensor protein ArcB	STP	3780325	3782658	-	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000002504_03745	Lipopolysaccharide export system permease protein LptG	TC	3782796	3783878	-	1.B.42.1.2
MGYG000002504_03746	Lipopolysaccharide export system permease protein LptF	TC	3783878	3784978	-	1.B.42.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature